PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG051840.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 114aa    MW: 12697.4 Da    PI: 4.7629
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG051840.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.74.1e-087397126
                       --S---SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                       +ktelC+ +   G C+ G+rC+FaHg
  TRIDC3BG051840.11 73 QKTELCNKWEG-GACSCGGRCRFAHG 97
                       69*******98.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MDFFRILENA FSVWFRLNCC PTVPAQPPNV LCLGRAFFQL LYWFSLHTDQ AGVDEAKGDG  60
EVVELEAYRQ GTQKTELCNK WEGGACSCGG RCRFAHGLQD DGFLISLTNQ GVQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.18e-14C3H family protein