PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG052290.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 321aa    MW: 35991.7 Da    PI: 9.5041
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG052290.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.71.1e-14133212190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF +r  ks+ + +++   +++ vC ++gk+e+++++         + r++C a++ + k  d+ w++++ +  HnH+l+
  TRIDC3BG052290.2 133 DFYNLYSWELGFGIRYGKSRLNAEKT-KCMQKIVCGCSGKPEQQNSR---------SCRCECPAMIGLLKAADNGWYIAEHRASHNHSLS 212
                       6*****************99995555.67889********9987655.........99*****************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
ACRRFPLTEV TADVERPDPL VLMDVRRSAP ATADSSCAVV VGNLGGSSEQ NRTGSKRKCS  60
PTQSAESTGK VTSEAPGWTR RLRLGRAPPN RKPFAGRVTP LEETIRRYAD KPTENVVKPE  120
IGMSFDSLGE AYDFYNLYSW ELGFGIRYGK SRLNAEKTKC MQKIVCGCSG KPEQQNSRSC  180
RCECPAMIGL LKAADNGWYI AEHRASHNHS LSLTCGEKVH WPSHKHIDVY TKHLVKQLRA  240
NNVNLNKVYS IVGSFFGSSQ SVPFTKRSLR HLCGRISRDQ ADDDVNKTLA VFKEIQRNYP  300
EFTYRVQGDE ESRIKKSNVD E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.16e-10FAR1 family protein