PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG052290.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 344aa MW: 38311.3 Da PI: 9.0883

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG052290.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.5	1.2e-14	156	235	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+ + +++ +++ vC ++gk+e+++++ + r++C a++ + k d+ w++++ + HnH+l+ TRIDC3BG052290.3 156 DFYNLYSWELGFGIRYGKSRLNAEKT-KCMQKIVCGCSGKPEQQNSR---------SCRCECPAMIGLLKAADNGWYIAEHRASHNHSLS 235 6***************99995555.67889****9987655.........99***************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MAAAQSAAMS AGIFQNGLEF LLDPVDRFPL TEVTADVERP DPLVLMDVRR SAPATADSSC 60 AVVVGNLGGS SEQNRTGSKR KCSPTQSAES TGKVTSEAPG WTRRLRLGRA PPNRKPFAGR 120 VTPLEETIRR YADKPTENVV KPEIGMSFDS LGEAYDFYNL YSWELGFGIR YGKSRLNAEK 180 TKCMQKIVCG CSGKPEQQNS RSCRCECPAM IGLLKAADNG WYIAEHRASH NHSLSLTCGE 240 KVHWPSHKHI DVYTKHLVKQ LRANNVNLNK VYSIVGSFFG SSQSVPFTKR SLRHLCGRIS 300 RDQADDDVNK TLAVFKEIQR NYPEFTYRVQ GDEESRIKKS NVDE

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MAAAQSAAMS AGIFQNGLEF LLDPVDRFPL TEVTADVERP DPLVLMDVRR SAPATADSSC  60
AVVVGNLGGS SEQNRTGSKR KCSPTQSAES TGKVTSEAPG WTRRLRLGRA PPNRKPFAGR  120
VTPLEETIRR YADKPTENVV KPEIGMSFDS LGEAYDFYNL YSWELGFGIR YGKSRLNAEK  180
TKCMQKIVCG CSGKPEQQNS RSCRCECPAM IGLLKAADNG WYIAEHRASH NHSLSLTCGE  240
KVHWPSHKHI DVYTKHLVKQ LRANNVNLNK VYSIVGSFFG SSQSVPFTKR SLRHLCGRIS  300
RDQADDDVNK TLAVFKEIQR NYPEFTYRVQ GDEESRIKKS NVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	5e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG052290.3