PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG052480.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 138aa    MW: 15695.1 Da    PI: 9.5875
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG052480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.93.3e-1336115190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       ++Yn Y+ e+GF vr  ks+ + + +   +++ vC ++g +++++++         +  + C a +++ ++kd+ w+++++ + HnH+l+
  TRIDC3BG052480.1  36 DYYNLYSWEIGFGVRYGKSRLNVERT-KCMQEIVCGCSGISKKSNTR---------TCWCRCPALIRLLRSKDNGWYISEFISSHNHSLM 115
                       69****************99995544.67899*******99886555.........889*****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MSALEKALRR YAEKKKDTVI VPAVGSTSHS LGEAYDYYNL YSWEIGFGVR YGKSRLNVER  60
TKCMQEIVCG CSGISKKSNT RTCWCRCPAL IRLLRSKDNG WYISEFISSH NHSLMEKCGG  120
KVYSSCSQVN KKNDVFKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-12FAR1 family protein