PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG052920.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 333aa    MW: 35831 Da    PI: 6.8575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG052920.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000272252621254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +A eYIk L
  TRIDC3BG052920.3 225 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 262
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
HRSSSTITHP PSSDAASSLG DVHMDWTHAF LSGRSDASFQ AVLQDDMLAS MTTRPLFRPH  60
QPAVDEAVMS NPFRDMSHSF SLLDQVPAAS SPYGTAPLQG MFDTTGASHN VSVLGECQSS  120
TSYDGTAGMQ LNQAATQMLG GGAQLQYLSG SGSYMPFGGA PLSSQLLLQA LQPKTSYSSS  180
SNSLMAKSAE HACSPPARRS EPDSPAAAKR PRIEAPSPLP TFKVRKEKLG DRITALQQLV  240
SPFGKTDTAS VLHEANEYIK FLHDQVASLT YPYLKNVNPL QQFQQKRSEN AKDDGGEPKK  300
DLRSRGLCLV PVATTYTVAS ETVPEFWYPT FGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.37e-47bHLH family protein