PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG053450.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 243aa    MW: 24751.7 Da    PI: 9.5465
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG053450.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-193383256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      +y+GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++ a+++++g+
  TRIDC3BG053450.1 33 HYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTYDTAEEAARAYDTAAREFRGA 83
                      6********.**********83...36*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAPRAAEKAP VSPPTRLGLG VGGGVGVVAG GAHYRGVRKR PWGRYAAEIR DPAKKSRVWL  60
GTYDTAEEAA RAYDTAAREF RGAKAKTNFP FPSSSSSSPV AGGGSPSSNS TLDSSGGGSG  120
GCAQAPMQAI PLPPALDLDL FHRAAAVTAV AGGGMRFPFN GYPVASRQPL HPYFFYEQAA  180
AAAAAASGYR ALKVAQPVTV AAVAQSDSDS SSVVDLSPSP PAVTAHKAVT FDLDLNGPPP  240
SED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-19ERF family protein