PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG054590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 343aa MW: 37353.1 Da PI: 9.8837

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG054590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.8	1.6e-15	273	318	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ +e TRIDC3BG054590.1 273 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ-KE 318 69****************************************65.34 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGSRKMASQQ GRGDAGTSQP GRGDAGTSQR GQVQSLARQG SLYSLTLDEV QNHLGEPLQS 60 MNLDELLRTV FPDDLEPDGA TTSQCVPSSS LLRQGSITMP TELSKKTVDE VWKGIQETPK 120 RSVQGSGRRK RERQPTLGEM TLEDFLVQAG VVSQGFLKDT SDVGNLGLMG RGATAAGATD 180 LTSGAQWLGQ YQQQIAASAI NTHQHVQQIV PAAYMPIQLV PQPLNVVGPG ATLGSAYSDG 240 QSTSPMISPI SDSQTPGRKR GVSGDVPNKF VERRQKRMIK NRESAARSRA RKQAYTNELE 300 NKVSRLEEEN ERLKKQKELN MMLCSVPLPE PKYQLRRTCS AAF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGSRKMASQQ GRGDAGTSQP GRGDAGTSQR GQVQSLARQG SLYSLTLDEV QNHLGEPLQS  60
MNLDELLRTV FPDDLEPDGA TTSQCVPSSS LLRQGSITMP TELSKKTVDE VWKGIQETPK  120
RSVQGSGRRK RERQPTLGEM TLEDFLVQAG VVSQGFLKDT SDVGNLGLMG RGATAAGATD  180
LTSGAQWLGQ YQQQIAASAI NTHQHVQQIV PAAYMPIQLV PQPLNVVGPG ATLGSAYSDG  240
QSTSPMISPI SDSQTPGRKR GVSGDVPNKF VERRQKRMIK NRESAARSRA RKQAYTNELE  300
NKVSRLEEEN ERLKKQKELN MMLCSVPLPE PKYQLRRTCS AAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	122	ETPKRS
2	127	134	GRRKRERQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-85	bZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG054590.1