PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG054610.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 101aa    MW: 11402.8 Da    PI: 9.4947
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG054610.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.8e-172576155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s+y+GV++++ +grW+A+I +       +++ +lg f+t eeAa+a++ a+ +++g
  TRIDC3BG054610.2 25 SKYRGVTRHHANGRWEARIGHaA----GTQYSYLGIFDTQEEAARAYDLAAIRIRG 76
                      89****************99933....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MQRMTREEYL ARLRRNSSGF TRGVSKYRGV TRHHANGRWE ARIGHAAGTQ YSYLGIFDTQ  60
EEAARAYDLA AIRIRGPGAV TNFDADCYVD IPQPLPCKAE P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.15e-36AP2 family protein