PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG055520.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 381aa MW: 41584.6 Da PI: 8.0189

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG055520.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.1	4.6e-21	209	269	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3BG055520.2 209 RQRWTPTQMQLQILESIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 269 89***************99************************************97 PP
2	Wus_type_Homeobox	102.3	3.4e-33	208	271	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3BG055520.2 208 ARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 271 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
PSSTCAGPRP PPAPPASPAP SSPPAAHFGP NSRGSSSLPT YLLPQTAGGK APYPSCSFLS 60 RVSTAPPQPG FGIGRADFLP FPRHQDPILF FLSKNPILPA SFLPTAWAPP FLRVSGLTME 120 WDKASAAAAA GEPAEERGEA LGYVKVMTDE QMEVLRKQIS IYATICEQLV EMHRALTAHQ 180 DSIAVSGMRL GNLYCDPLMV HGGHKITARQ RWTPTQMQLQ ILESIFDQGN GTPSKQKIKD 240 ITAELSQHGQ ISETNVYNWF QNRRARSKRK QAASSLPSNT ESEAEGDEDS PTDKKPRSDG 300 SQQQSMAARA HNPERISEMH RHFDAAEREQ VRGPMYGSGN DSGARPSGGL GQMSFYENVM 360 SNPRIDQFFQ YRTGESFNMS G

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

PSSTCAGPRP PPAPPASPAP SSPPAAHFGP NSRGSSSLPT YLLPQTAGGK APYPSCSFLS  60
RVSTAPPQPG FGIGRADFLP FPRHQDPILF FLSKNPILPA SFLPTAWAPP FLRVSGLTME  120
WDKASAAAAA GEPAEERGEA LGYVKVMTDE QMEVLRKQIS IYATICEQLV EMHRALTAHQ  180
DSIAVSGMRL GNLYCDPLMV HGGHKITARQ RWTPTQMQLQ ILESIFDQGN GTPSKQKIKD  240
ITAELSQHGQ ISETNVYNWF QNRRARSKRK QAASSLPSNT ESEAEGDEDS PTDKKPRSDG  300
SQQQSMAARA HNPERISEMH RHFDAAEREQ VRGPMYGSGN DSGARPSGGL GQMSFYENVM  360
SNPRIDQFFQ YRTGESFNMS G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	271	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-59	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG055520.2