PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG055520.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 249aa MW: 28083.5 Da PI: 8.6882

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG055520.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.1	2.3e-21	77	137	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3BG055520.4 77 RQRWTPTQMQLQILESIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 137 89***************99************************************97 PP
2	Wus_type_Homeobox	103.3	1.6e-33	76	139	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3BG055520.4 76 ARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 139 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MVHSGNRPMT IVILDRLLTH SLLSFCTFSV FLLVYSTVAV SVFLLFQVTF QFFSGMRLGN 60 LYCDPLMVHG GHKITARQRW TPTQMQLQIL ESIFDQGNGT PSKQKIKDIT AELSQHGQIS 120 ETNVYNWFQN RRARSKRKQA ASSLPSNTES EAEGDEDSPT DKKPRSDGSQ QQSMAARAHN 180 PERISEMHRH FDAAEREQVR GPMYGSGNDS GARPSGGLGQ MSFYENVMSN PRIDQFFQYR 240 TGESFNMSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-38	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG055520.4