PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG056180.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 251aa    MW: 26559.1 Da    PI: 6.4153
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG056180.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.76e-41621611100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+Ca++C++apyf  ++p+kfa+vhk+FGasnv+k+l ++pe er da+sslvyeA+ r+rdPvyG++g i+ lqqq++ l+ae
  TRIDC3BG056180.2  62 PCAACKLLRRRCAHECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLEVPEPERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAE 154
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       l+++++e
  TRIDC3BG056180.2 155 LQAVRAE 161
                       **99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MIFWTSTRER LDEIGKKIKR EPDPASAIAG VVVAVSQTEH HVPRRLGLVG PGIGGAANIA  60
TPCAACKLLR RRCAHECPFA PYFSPHEPHK FAAVHKVFGA SNVSKMLLEV PEPERADAAS  120
SLVYEANLRL RDPVYGCMGA ISMLQQQVNA LEAELQAVRA EIFKHRYRQT GVGVGVGAAN  180
LIVDDDVSAA AAGGFMAPAT SLVHTAGVVS VAEAGQEVDT MPSTATAYAA GQPSSTDYSS  240
LDTSEHDAYF G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.13e-65LBD family protein