PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG057180.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 187aa MW: 20838.2 Da PI: 8.9871

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG057180.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179	4.3e-56	54	147	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr++ TRIDC3BG057180.7 54 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRDV 146 69*****************************************************************************************98 PP NF-YB 94 e 94 TRIDC3BG057180.7 147 I 147 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
LPFPAPPRSA NHRPPPPPPF SPLRSSSRAR VFIRVSGRGM ADDDSGSPRG GGGVREQDRF 60 LPIANISRIM KKAVPANGKI AKDAKETLQE CVSEFISFVT SEASDKCQKE KRKTINGDDL 120 LWAMATLGFE EYVDPLKIYL QKYRDVIMAL AHYQYLLQMT IILLFCISHL TSLLLCLPCN 180 FLDGRGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	9e-59	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG057180.7