PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG057870.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 140aa MW: 14334 Da PI: 8.9831

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG057870.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00054	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F L H+r+H TRIDC3BG057870.3 79 HECPVCGLEFAVGQALGGHMRRH 101 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
LEAWTRPACS CSSRSSTSSI NTSAPSPGRR RRWAAGACSS ARRATGSSPR SRRSEGTAPA 60 TSDPGAPQAP PLPAKPRAHE CPVCGLEFAV GQALGGHMRR HRVEAEAATN APSGKAAEPE 120 MVVASCDAGG ICLDLNLTPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-16	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG057870.3