PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG057890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 191aa MW: 20523.4 Da PI: 9.6055

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG057890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H TRIDC3BG057890.1 53 FQCKTCNRQFPTFQALGGHRASH 75 89**********99999998887 PP
2	zf-C2H2	12.3	0.00052	96	118	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg F L H+r+H TRIDC3BG057890.1 96 HECPICGLEFAVGQALGGHMRRH 118 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
SAMSKRGRGV WDMELGSLDT TRLLMLLAQQ HQHQHHHRGV AEAAQAMTGG RVFQCKTCNR 60 QFPTFQALGG HRASHKRPRL HHPPPQHALP ARPRVHECPI CGLEFAVGQA LGGHMRRHRV 120 EAEAEAGANA PSSKAAAATE MVVASCDDAG ICLDLNLTPS ENCAKCKSAA VLRAATGQGV 180 HKALGGHMSR Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-28	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG057890.1