PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG058280.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 290aa    MW: 32336.4 Da    PI: 10.0992
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG058280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.33.1e-143998357
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       R+ +t+eql +Le l+++  r+p aee+ + +++l     ++ ++V+ WFqN+  + ++
  TRIDC3BG058280.1 39 ARWVPTREQLAVLEGLYRQgMRTPAAEEIHQVTARLqehgPIEGKNVFHWFQNQQVRLRQ 98
                      6*****************99****************99999*************998875 PP
2Wus_type_Homeobox93.12.5e-303899364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++RW Pt eQ+ +Le ly++G+rtP++eei+++ta+L+e+G ie+kNVf+WFQN++ R rq+
   TRIDC3BG058280.1 38 NARWVPTREQLAVLEGLYRQGMRTPAAEEIHQVTARLQEHGPIEGKNVFHWFQNQQVRLRQR 99
                       68*********************************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MESVDHHDEA ATRLSLSTPR PPAPLSLTPS PNSAALVNAR WVPTREQLAV LEGLYRQGMR  60
TPAAEEIHQV TARLQEHGPI EGKNVFHWFQ NQQVRLRQRE KQQRSDYFAR QFRRPQPLPV  120
LHSPSGHPFS PVQLQAPPAP NTPACNGEAM YMQQPCYMSR PAAQAAANAT YYSQMQPKIV  180
YPSAEMMAHG NVHAQAQAAM YYRAAFSNDS NTQQMRVLQS SPVAGSYGAS DAYSHRPVLL  240
NLFPQYPTFA NRKKTRRVGR VGSARPSSSG SISWETESPK IPNTHIVVDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.13e-27WOX family protein