PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG058440.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 607aa    MW: 68555 Da    PI: 7.4256
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG058440.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.61.5e-1152336022374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+ vs +d + a+ lL++++++as +gd  qRla++f+++L+arla+++s++yk  + s+ +    ++ l+a++l+  ++P+ k+s
  TRIDC3BG058440.5 233 ETLLIHCAQSVSIDDRRSATDLLKQIRQHASANGDGDQRLAHCFANGLEARLAGNGSQIYKLHTISRFA---CADILKAYQLYLAACPFKKIS 322
                       789**********************************************************99999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h  aNq+I++ave++++vHi+Df++ +G+QWp+L+q L++Rp+gpp+lRiT+++ p++g   +e++ee+g+ L+++A++++vpf+++  +a++
  TRIDC3BG058440.5 323 HYFANQTIMNAVEKAKKVHIVDFGVYYGFQWPCLIQRLSKRPGGPPELRITAIDTPQPGfrPAERIEEIGRYLSDYAQTFKVPFKYHG-IASQ 414
                       ****************************************************************************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L ++++E l+Vn++++ ++l+desv  es+r+ vL+++++++P+v+++   + ++n++ F+ rf eal  +sa fd+lea++pr+
  TRIDC3BG058440.5 415 FEAVRVEDLPIEKDEILIVNSMFRFKTLMDESVVAESPRNMVLNTIRKMKPHVFIHGVTNGSYNAPFFVSRFREALFQFSAHFDMLEANIPRD 507
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       +eer  +E  +++re+ nv++ceg er er et+++W+ r ++aGFk++pl+++++k a+  ++ ++++ + ++e++g+l++gWk+r L+++S
  TRIDC3BG058440.5 508 NEERLLIESTIFSREAINVISCEGMERMERPETYKQWQVRNQRAGFKQLPLDQEIMKRAREKVKCYHKN-FIIDEDNGWLLQGWKGRILYALS 599
                       ****************************************************************99966.*********************** PP

              GRAS 372 aWr 374
                        W+
  TRIDC3BG058440.5 600 TWK 602
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
FLQPPQFYQD LSPESCVVEA GGAWPYDAME FNPLPDALLS QSSSFASSNG SSVAFSEGFE  60
PWLSTAGAVP DAGLSDFVLQ SQQAAQFSRG FEEGSRFLPQ ESKLVIDVDS LPSVWVKEDK  120
KVVEVKREKA DAEVAIHRGK KHFYGDDLDA DEVRCCKHSA PVVDADHLVR EMMDKVLLCN  180
GETCSRGVKE LREALQHDVA AHSGGAHGKG SGHGKGRGKK QVKQPKKEVV DLETLLIHCA  240
QSVSIDDRRS ATDLLKQIRQ HASANGDGDQ RLAHCFANGL EARLAGNGSQ IYKLHTISRF  300
ACADILKAYQ LYLAACPFKK ISHYFANQTI MNAVEKAKKV HIVDFGVYYG FQWPCLIQRL  360
SKRPGGPPEL RITAIDTPQP GFRPAERIEE IGRYLSDYAQ TFKVPFKYHG IASQFEAVRV  420
EDLPIEKDEI LIVNSMFRFK TLMDESVVAE SPRNMVLNTI RKMKPHVFIH GVTNGSYNAP  480
FFVSRFREAL FQFSAHFDML EANIPRDNEE RLLIESTIFS REAINVISCE GMERMERPET  540
YKQWQVRNQR AGFKQLPLDQ EIMKRAREKV KCYHKNFIID EDNGWLLQGW KGRILYALST  600
WKANPQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-164GRAS family protein