PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG059490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 211aa MW: 24355.3 Da PI: 7.9949

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG059490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.8	2.4e-20	11	72	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF+ r+ps+e++++++++l +++ ++V++WFqN++a+e++ TRIDC3BG059490.1 11 KCGRWNPTAEQVKVLTELFRAgLRTPSTEQIQRISTHLsafgKVESKNVFYWFQNHKARERH 72 568***************99************************************95 PP
2	Wus_type_Homeobox	110.8	7.7e-36	12	73	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + RW+Pt+eQ+k+L+el+++GlrtP++e+iqri+++L+++Gk+e+kNVfyWFQN+kaRer++ TRIDC3BG059490.1 12 CGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73 78**********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MEALSGRVGV KCGRWNPTAE QVKVLTELFR AGLRTPSTEQ IQRISTHLSA FGKVESKNVF 60 YWFQNHKARE RHHHKKRRRV ASCSPDSSSN EEESGRAAAA EPADLVLQPP ESKREARGYN 120 HHPRIMTYAG YVREVTEQEE ATTWERPTRE VETLELFPLK AAYDLELEAD RFSRYVRGGE 180 QQCREISFFD VATGRDPPLE LRLCSFDRYL V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	80	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	2e-31	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG059490.1