PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG059490.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 207aa MW: 23954.8 Da PI: 7.9183

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG059490.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.9	2.3e-20	11	72	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF+ r+ps+e++++++++l +++ ++V++WFqN++a+e++ TRIDC3BG059490.2 11 KCGRWNPTAEQVKVLTELFRAgLRTPSTEQIQRISTHLsafgKVESKNVFYWFQNHKARERH 72 568***************99************************************95 PP
2	Wus_type_Homeobox	110.8	7.4e-36	12	73	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + RW+Pt+eQ+k+L+el+++GlrtP++e+iqri+++L+++Gk+e+kNVfyWFQN+kaRer++ TRIDC3BG059490.2 12 CGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73 78**********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MEALSGRVGV KCGRWNPTAE QVKVLTELFR AGLRTPSTEQ IQRISTHLSA FGKVESKNVF 60 YWFQNHKARE RHHHKKRRRV ASCSPDSSSN EEESGRAAAA EPADLVLQPP ESKREARGYN 120 HHPRIMTCYV REVTEQEEAT TWERPTREVE TLELFPLKAA YDLELEADRF SRYVRGGEQQ 180 CREISFFDVA TGRDPPLELR LCSFDRY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	80	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	2e-31	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG059490.2