PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG059570.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 453aa MW: 49124 Da PI: 6.7229

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG059570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.4e-19	141	186	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+WT+eEdell ++v ++G + W+tI+++++ gR +kqc++rw ++ TRIDC3BG059570.1 141 RGPWTEEEDELLRRLVDEHGEHKWATISEHLP-GRIGKQCRERWTNH 186 89****************************.*********997 PP
2	Myb_DNA-binding	52.6	1e-16	197	236	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+ +d ll+da+k +G++ W++Iar+++ gR+++ +k++w+ TRIDC3BG059570.1 197 WTEADDILLIDAHKVHGNR-WSSIARCLP-GRSENAVKNHWN 236 *****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
LCQTLPLSLS LDSAKFHPPS PTSSLVSEFR PPAMASLGDM LLNQELAAVA AMSADAHGRF 60 GRYTLSPAHG FSHFQQAGSA PTGFPDTGLL VSGFGMPPST FIMPEGTHAA AGYGAEVVPV 120 EIPVVRRQRP AARNDGATPF RGPWTEEEDE LLRRLVDEHG EHKWATISEH LPGRIGKQCR 180 ERWTNHVRPG IKKEHIWTEA DDILLIDAHK VHGNRWSSIA RCLPGRSENA VKNHWNATRR 240 SLKSKRRFKK KTSQQAAPGQ FTLLEEYIRD KMMADENLAP SSPLAGVAYD GQVVPGAAAM 300 LAVSTPPGMG QYLHPANAAG SSSQAGMMNL SVPLPDLNAY SGEMLERYYY PTYSNNLLPY 360 GPEPAFPQMF NAQGRMHAAC TNLNLFPLPQ HPGGGYYGSE TGRRSAGGGY YGSETGRSSA 420 GGSSDQDEDV AQMASREFQT SEDEATLDLT GFN

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

LCQTLPLSLS LDSAKFHPPS PTSSLVSEFR PPAMASLGDM LLNQELAAVA AMSADAHGRF  60
GRYTLSPAHG FSHFQQAGSA PTGFPDTGLL VSGFGMPPST FIMPEGTHAA AGYGAEVVPV  120
EIPVVRRQRP AARNDGATPF RGPWTEEEDE LLRRLVDEHG EHKWATISEH LPGRIGKQCR  180
ERWTNHVRPG IKKEHIWTEA DDILLIDAHK VHGNRWSSIA RCLPGRSENA VKNHWNATRR  240
SLKSKRRFKK KTSQQAAPGQ FTLLEEYIRD KMMADENLAP SSPLAGVAYD GQVVPGAAAM  300
LAVSTPPGMG QYLHPANAAG SSSQAGMMNL SVPLPDLNAY SGEMLERYYY PTYSNNLLPY  360
GPEPAFPQMF NAQGRMHAAC TNLNLFPLPQ HPGGGYYGSE TGRRSAGGGY YGSETGRSSA  420
GGSSDQDEDV AQMASREFQT SEDEATLDLT GFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	7e-34	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG059570.1