PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG060460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 258aa    MW: 28048.3 Da    PI: 5.4061
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG060460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM136.31.9e-4291401128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       lppG+rF Pt+eel+++yL++k++g++ ++e+vi+ vd+y+v+P +L +     + +e + w++F+ r++++a+g r++r+t sgyWka g+ 
  TRIDC3BG060460.1   9 LPPGYRFYPTEEELICFYLRNKLDGSRGDIERVIPVVDVYSVDPLQLSEiherLCGGEGEPWFYFCARQEREARGGRPSRTTPSGYWKAAGTP 101
                       79****************************99***************84344433447789******************************** PP

               NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s++++ +gl+kt+vfy+grap+g+kt+W m+eyr+
  TRIDC3BG060460.1 102 GVVYSADRRPIGLRKTMVFYRGRAPSGTKTKWKMNEYRA 140
                       *************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
PETVMADGLP PGYRFYPTEE ELICFYLRNK LDGSRGDIER VIPVVDVYSV DPLQLSEIHE  60
RLCGGEGEPW FYFCARQERE ARGGRPSRTT PSGYWKAAGT PGVVYSADRR PIGLRKTMVF  120
YRGRAPSGTK TKWKMNEYRA FQHEHHDDGA GAPTATGGPH AAAPPVPNLP PQLRSEFSLC  180
RLYTKSGTLR QFDRRPVAAA ARGDIPGPST AATASPGDGD GSGGSMQPLE EELMEGADGD  240
PYGDDIATLA ALLYSPTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-67NAC family protein