PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG060460.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 200aa    MW: 22035 Da    PI: 8.4651
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG060460.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.39.5e-4351361128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       lppG+rF Pt+eel+++yL++k++g++ ++e+vi+ vd+y+v+P +L +     + +e + w++F+ r++++a+g r++r+t sgyWka g+ 
  TRIDC3BG060460.2   5 LPPGYRFYPTEEELICFYLRNKLDGSRGDIERVIPVVDVYSVDPLQLSEiherLCGGEGEPWFYFCARQEREARGGRPSRTTPSGYWKAAGTP 97 
                       79****************************99***************84344433447789******************************** PP

               NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s++++ +gl+kt+vfy+grap+g+kt+W m+eyr+
  TRIDC3BG060460.2  98 GVVYSADRRPIGLRKTMVFYRGRAPSGTKTKWKMNEYRA 136
                       *************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MADGLPPGYR FYPTEEELIC FYLRNKLDGS RGDIERVIPV VDVYSVDPLQ LSEIHERLCG  60
GEGEPWFYFC ARQEREARGG RPSRTTPSGY WKAAGTPGVV YSADRRPIGL RKTMVFYRGR  120
APSGTKTKWK MNEYRAFQHE HHDDGAGAPT ATGGPHAAAP PVPNLPPQTD MAVTLAPDKC  180
RSKSSSQLAI HLGIGFGLCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-59NAC family protein