PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG060460.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 194aa MW: 21823.9 Da PI: 11.4541

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG060460.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.7	1.6e-25	47	122	53	128
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +e + w++F+ r++++a+g r++r+t sgyWka g+ v+s++++ +gl+kt+vfy+grap+g+kt+W m+eyr+ TRIDC3BG060460.3 47 GEGEPWFYFCARQEREARGGRPSRTTPSGYWKAAGTPGVVYSADRRPIGLRKTMVFYRGRAPSGTKTKWKMNEYRA 122 45679*********************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MLLPAQQARR QPRRHRARHP RRRRLLRRPL AALRRTYAEI HERLCGGEGE PWFYFCARQE 60 REARGGRPSR TTPSGYWKAA GTPGVVYSAD RRPIGLRKTM VFYRGRAPSG TKTKWKMNEY 120 RAFQHEHHDD GAGAPTATGG PHAAAPPVPN LPPQSDVNLY CFVAEKRVQL VSTLHQIGDT 180 AAVRSTAGCS CCTR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	25	RRQPRRHRARHPRRRRL
2	13	29	RRHRARHPRRRRLLRRP
3	22	29	RRRLLRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.1	2e-36	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG060460.3