PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG060470.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 205aa    MW: 22438.7 Da    PI: 12.8337
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG060470.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.5e-09144182947
                       HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++l++d+ +++G g+W+ I+r     Rt+ q+ s+ qky
  TRIDC3BG060470.2 144 HQLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 182
                       89************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
CRVVAAGKRV RETRGHGLLL PAGRAAGEEA VGQGGGQGVR GRAGDAPGPR ARPVGARRGA  60
APGAHPTGGL GALPGARRRR RPHRARRGGH ARLLGRRRRR PRYRGQPRPP RRQAPRRGAP  120
ARHTLVRGRA QVRVPKSPSL LFSHQLFLDG LEKYGRGDWR NISRFAVRSR TPTQVASHAQ  180
KYFIRQANAA TRDSKRKSIH DITTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17799RRRRRPHRARRGGHARLLGRRRR
278100RRRRRPHRARRGGHARLLGRRRR
379101RRRRRPHRARRGGHARLLGRRRR
48699RRGGHARLLGRRRR
587100RRGGHARLLGRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-23MYB_related family protein