PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG060470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 158aa MW: 18406.5 Da PI: 9.4105

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG060470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.9	1.1e-08	21	67	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 r +W +eEd+ + a +l+ + +W+++a++++ gRt+ + +++q TRIDC3BG060470.3 21 RRPWAKEEDKAFEAALVMLPDHapdRWERVAARLP-GRTPQEAWEHYQ 67 679***************99*********.**98777777 PP
2	Myb_DNA-binding	46	1.2e-14	91	135	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE++l++d+ +++G g+W+ I+r Rt+ q+ s+ qky TRIDC3BG060470.3 91 PWSEEEHKLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 135 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
RESERPEAMD FYYQQAGPPA RRPWAKEEDK AFEAALVMLP DHAPDRWERV AARLPGRTPQ 60 EAWEHYQALV ADVDLIERGA PRGEERRRGI PWSEEEHKLF LDGLEKYGRG DWRNISRFAV 120 RSRTPTQVAS HAQKYFIRQA NAATRDSKRK SIHDITTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	6e-41	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG060470.3