PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG060860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 260aa    MW: 29505.6 Da    PI: 9.2692
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG060860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.31.3e-35381802128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra............ 77 
                       p+G++F+Ptd+el+ e+L+ kv ++ ++l +    +i+   +i++++P++Lp  v+ + ++ +fF++ +k+y+tg+rk+r+            
  TRIDC3BG060860.2  38 PAGVKFDPTDQELI-EHLESKVMKRAHSLIDdfipTIEGEdGICYTHPEKLP-GVTRNGQSKHFFHRPSKAYTTGTRKRRKihaenelsnskn 128
                       89************.99*****99996654423223555545**********.555667899******************8788988888665 PP

               NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        ++ +W++tgk++++++ +g+++g+kk+Lv+y   g+a+k+ekt+Wvmh+y+l
  TRIDC3BG060860.2 129 GAETRWHKTGKTRPLMV-DGRHKGCKKILVLYsnFGKARKPEKTNWVMHQYHL 180
                       44678************.999***********544799*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
YFKSMMDAKL QEQGFFASQH CVNCGHELDY KPDMVGFPAG VKFDPTDQEL IEHLESKVMK  60
RAHSLIDDFI PTIEGEDGIC YTHPEKLPGV TRNGQSKHFF HRPSKAYTTG TRKRRKIHAE  120
NELSNSKNGA ETRWHKTGKT RPLMVDGRHK GCKKILVLYS NFGKARKPEK TNWVMHQYHL  180
GDLEDEKEGE LIVSKVFYQT QPRQSAAATT STVLHEPSTN GDMEVKTPKS MKIGLADYAV  240
VAAAAIQMQR QQQQMLKQGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-102NAC family protein