PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG061100.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 242aa    MW: 26100.9 Da    PI: 11.5855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG061100.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a++ a+++++g
  TRIDC3BG061100.3 23 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDDAALRFRG 72
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEEHRSRSPA SSNVEAAEAP RRRYRGVRQR PWGKWAAEIR DPHKAARVWL GTFETAEAAA  60
RAYDDAALRF RGSRAKLNFP EDARLHPATV APAAAPARVP IAAASASTPG MYAGAGPASD  120
YLRYQMLLQG RGAAANQELV RRRHEQLIWR RRRHHERFPG LLLLVPDLLR LGGHRPVILL  180
RVLCSGPLLL VAARLAAAPA AAGQRGGGVE LGERAGALPG DDDGGLLVRL EPAAVPPAAH  240
PI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141153RRRHEQLIWRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.18e-15ERF family protein