PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG062450.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 571aa    MW: 63478.7 Da    PI: 5.1891
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG062450.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.78.2e-26178231155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+gLt+e+v+SHLQkYRl
  TRIDC3BG062450.1 178 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 231
                       68*******************.9*******************************8 PP
2Myb_DNA-binding40.46.6e-13180230148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ ++++++v+av+q G +   +k+I   m+  g+t++++ s++qky+
  TRIDC3BG062450.1 180 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPGLTRENVASHLQKYR 230
                       678***********************************************7 PP
3Response_reg78.91.8e-2611082109
                       EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
      Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                       l+vdD+p+ +++l+++l+k  y ev+++  ++ ale+l+e++  +D+++ D++mp+mdG++ll++i  e  +lp+i+++  ge + + + ++ 
  TRIDC3BG062450.1   1 LVVDDDPTWLKILEKMLRKCSY-EVTTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQH 91 
                       79********************.***************877778**********************6654.8********************* PP

                       TESEEEESS--HHHHHH CS
      Response_reg  93 GakdflsKpfdpeelvk 109
                       Ga d+l Kp+ ++el++
  TRIDC3BG062450.1  92 GACDYLLKPVRMKELRN 108
                       **************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    
LVVDDDPTWL KILEKMLRKC SYEVTTCGLA RVALEILRER KNRFDIVISD VNMPDMDGFK  60
LLEHIGLEMD LPVIMMSIDG ETSRVMKGVQ HGACDYLLKP VRMKELRNIW QHVYRKKMHE  120
VKEIEGHDSC DDLQILRYGF EGFDEKGLFM TVDSDATRKR KDVDHGDQDS SDGATAKKAR  180
VVWSVDLHQK FVNAVNQIGF DKVGPKKILD LMNVPGLTRE NVASHLQKYR LYLGRLQKQN  240
EERLLGSARQ DFSTKGPSSE NLNLRSSFQE QPSNTSSGYP HASQKIQGQS SVSDSQLEET  300
KRMVPLPAPD RSMNSVSSAA EPQNVAGVSP IGGVLSFKGL PVNQDRKPSE TMILECQAWT  360
GGVPAKQFMQ YPKHNHARCD LLGDYACLPK PDLEHPTAPG HLFTPPPLIS MSCSTEMDAR  420
NFSDVKPALV DCIKSFSPAL TCTADSVSVQ ISDSVVTSTD AADRKFSSVE GLPTTKDCYF  480
GQTSNQGSWL RSQEEPSIIC GADFASLPED LPGYPLQGGV SFENVGLSSI DLFHYNDAMI  540
LSGLQSNWYD DQDHFSSETT DYPLMDGCLF A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-109ARR-B family protein