PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG062450.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 535aa MW: 59308 Da PI: 5.484

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG062450.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.4	4.3e-25	141	195	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+G + Pk+il+lm+v+gLt+e+v+SHLQkYRl TRIDC3BG062450.2 141 KARVVWSVDLHQKFVNAVNQIGFDSEVGPKKILDLMNVPGLTRENVASHLQKYRL 195 68*****************99999**************************8 PP
2	Myb_DNA-binding	40.4	6.9e-13	143	194	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ g+t++++ s++qky+ TRIDC3BG062450.2 143 RVVWSVDLHQKFVNAVNQIGFDsevGPKKILDLMNvPGLTRENVASHLQKYR 194 678************************************************7 PP
3	Response_reg	63.4	1.1e-21	2	97	14	109
HHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--H CS Response_reg 14 lrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdp 104 l+++l+k y ev+++ ++ ale+l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge + + + ++ Ga d+l Kp+ + TRIDC3BG062450.2 2 LEKMLRKCSY-EVTTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRM 92 78999999.***********877778******************6654.8***************************** PP HHHHH CS Response_reg 105 eelvk 109 +el++ TRIDC3BG062450.2 93 KELRN 97 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
ILEKMLRKCS YEVTTCGLAR VALEILRERK NRFDIVISDV NMPDMDGFKL LEHIGLEMDL 60 PVIMMSIDGE TSRVMKGVQH GACDYLLKPV RMKELRNIWQ HVYRKKMHEV KEIEVDSDAT 120 RKRKDVDHGD QDSSDGATAK KARVVWSVDL HQKFVNAVNQ IGFDSEVGPK KILDLMNVPG 180 LTRENVASHL QKYRLYLGRL QKQNEERLLG SARQDFSTKG PSSENLNLRS SFQEQPSNTS 240 SGYPHASQKI QGQSSVSDSQ LEETKRMVPL PAPDRSMNSV SSAAEPQNVA GVSPIGGVLS 300 FKGLPVNQDR KPSETMILEC QAWTGGVPAK QFMQYPKHNH ARCDLLGDYA CLPKPDLEHP 360 TAPGHLFTPP PLISMSCSTE MDARNFSDVK PALVDCIKSF SPALTCTADS VSVQISDSVV 420 TSTDAADRKF SSVEGLPTTK DCYFGQTSNQ GSWLRSQEEP SIICGADFAS LPEDLPGYPL 480 QGGVSFENVG LSSIDLFHYN DAMILSGLQS NWYDDQDHFS SETTDYPLMD GCLFA

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

ILEKMLRKCS YEVTTCGLAR VALEILRERK NRFDIVISDV NMPDMDGFKL LEHIGLEMDL  60
PVIMMSIDGE TSRVMKGVQH GACDYLLKPV RMKELRNIWQ HVYRKKMHEV KEIEVDSDAT  120
RKRKDVDHGD QDSSDGATAK KARVVWSVDL HQKFVNAVNQ IGFDSEVGPK KILDLMNVPG  180
LTRENVASHL QKYRLYLGRL QKQNEERLLG SARQDFSTKG PSSENLNLRS SFQEQPSNTS  240
SGYPHASQKI QGQSSVSDSQ LEETKRMVPL PAPDRSMNSV SSAAEPQNVA GVSPIGGVLS  300
FKGLPVNQDR KPSETMILEC QAWTGGVPAK QFMQYPKHNH ARCDLLGDYA CLPKPDLEHP  360
TAPGHLFTPP PLISMSCSTE MDARNFSDVK PALVDCIKSF SPALTCTADS VSVQISDSVV  420
TSTDAADRKF SSVEGLPTTK DCYFGQTSNQ GSWLRSQEEP SIICGADFAS LPEDLPGYPL  480
QGGVSFENVG LSSIDLFHYN DAMILSGLQS NWYDDQDHFS SETTDYPLMD GCLFA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	124	RKKMHEVKEIEVDSDATRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-100	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG062450.2