PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG062450.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 549aa MW: 60772.5 Da PI: 5.2556

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG062450.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81.8	7.8e-26	156	209	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl TRIDC3BG062450.3 156 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 209 68*****************.9*****************************8 PP
2	Myb_DNA-binding	40.5	6.3e-13	158	208	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ g+t++++ s++qky+ TRIDC3BG062450.3 158 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPGLTRENVASHLQKYR 208 678***********************************************7 PP
3	Response_reg	57.4	8.1e-20	3	86	27	109
EEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 27 aeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +++ ++ ale+l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ TRIDC3BG062450.3 3 TTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 86 5666678899999777777********************6654.8*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
AVTTCGLARV ALEILRERKN RFDIVISDVN MPDMDGFKLL EHIGLEMDLP VIMMSIDGET 60 SRVMKGVQHG ACDYLLKPVR MKELRNIWQH VYRKKMHEVK EIEGHDSCDD LQILRYGFEG 120 FDEKGLFMTV DSDATRKRKD VDHGDQDSSD GATAKKARVV WSVDLHQKFV NAVNQIGFDK 180 VGPKKILDLM NVPGLTRENV ASHLQKYRLY LGRLQKQNEE RLLGSARQDF STKGPSSENL 240 NLRSSFQEQP SNTSSGYPHA SQKIQGQSSV SDSQLEETKR MVPLPAPDRS MNSVSSAAEP 300 QNVAGVSPIG GVLSFKGLPV NQDRKPSETM ILECQAWTGG VPAKQFMQYP KHNHARCDLL 360 GDYACLPKPD LEHPTAPGHL FTPPPLISMS CSTEMDARNF SDVKPALVDC IKSFSPALTC 420 TADSVSVQIS DSVVTSTDAA DRKFSSVEGL PTTKDCYFGQ TSNQGSWLRS QEEPSIICGA 480 DFASLPEDLP GYPLQGGVSF ENVGLSSIDL FHYNDAMILS GLQSNWYDDQ DHFSSETTDY 540 PLMDGCLFA

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

AVTTCGLARV ALEILRERKN RFDIVISDVN MPDMDGFKLL EHIGLEMDLP VIMMSIDGET  60
SRVMKGVQHG ACDYLLKPVR MKELRNIWQH VYRKKMHEVK EIEGHDSCDD LQILRYGFEG  120
FDEKGLFMTV DSDATRKRKD VDHGDQDSSD GATAKKARVV WSVDLHQKFV NAVNQIGFDK  180
VGPKKILDLM NVPGLTRENV ASHLQKYRLY LGRLQKQNEE RLLGSARQDF STKGPSSENL  240
NLRSSFQEQP SNTSSGYPHA SQKIQGQSSV SDSQLEETKR MVPLPAPDRS MNSVSSAAEP  300
QNVAGVSPIG GVLSFKGLPV NQDRKPSETM ILECQAWTGG VPAKQFMQYP KHNHARCDLL  360
GDYACLPKPD LEHPTAPGHL FTPPPLISMS CSTEMDARNF SDVKPALVDC IKSFSPALTC  420
TADSVSVQIS DSVVTSTDAA DRKFSSVEGL PTTKDCYFGQ TSNQGSWLRS QEEPSIICGA  480
DFASLPEDLP GYPLQGGVSF ENVGLSSIDL FHYNDAMILS GLQSNWYDDQ DHFSSETTDY  540
PLMDGCLFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	3e-92	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG062450.3