PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG062710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 314aa    MW: 34856.7 Da    PI: 6.1126
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG062710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind100.41.7e-31211132103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y+++ d++++ l++w +++nsf+v+d   f++ +Lp +Fkh n++SFvRQLn YgF+kv+ ++         weF+h+sF +g+++ll
  TRIDC3BG062710.1  21 FVAKTYQMVCDPRTDALVRWGRDNNSFLVTDVAGFSQLLLPCFFKHGNLSSFVRQLNSYGFRKVHPDR---------WEFAHESFLRGQTHLL 104
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                        +i r+k++
  TRIDC3BG062710.1 105 PRIVRRKKK 113
                       *****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDGLHTELAL GLIGELETAP FVAKTYQMVC DPRTDALVRW GRDNNSFLVT DVAGFSQLLL  60
PCFFKHGNLS SFVRQLNSYG FRKVHPDRWE FAHESFLRGQ THLLPRIVRR KKKRGETSCS  120
SLVGGGEQHV MANIGEEVEE GEDDEGREAL LEEVRRLRQE QTAIGEQLAR MSRRLQATKR  180
LSDRLMPFLA RLDEDPNATS LHLLQQAAEK KLQRMKLPSR DFASFPIAPP LHLAPSPLLA  240
LGDEAMCGAR VGQWAEPMPL KLPTLEEPST SSGVQQVPEF EGGGRDSGSG TGITDSGTAV  300
EIPFPFCLLG QCFF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109114RRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-47HSF family protein