PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG062710.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 149aa MW: 16403.7 Da PI: 9.4818

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG062710.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	66.3	7e-21	21	79	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 F+ k+y+++ d++++ l++w +++nsf+v+d f++ +Lp +Fkh n++SFvRQLn Y TRIDC3BG062710.2 21 FVAKTYQMVCDPRTDALVRWGRDNNSFLVTDVAGFSQLLLPCFFKHGNLSSFVRQLNSY 79 9*********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MDGLHTELAL GLIGELETAP FVAKTYQMVC DPRTDALVRW GRDNNSFLVT DVAGFSQLLL 60 PCFFKHGNLS SFVRQLNSYV STLPPACTVS GRYTRTDGSS RTSHSCAVRR TFCRASCAAR 120 SAARPLPRVK ELAKSGNQPN SRRQQDCSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	1e-23	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG062710.2