PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG062910.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 197aa MW: 21110.5 Da PI: 8.7606

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG062910.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.5	3.6e-06	166	192	6	34
HHHHHHHHHHHHHHHHHHHCTSCC.C...T CS HLH 6 nerErrRRdriNsafeeLrellPk.askap 34 +++Er RR ri +++ +L++l+P+ + + TRIDC3BG062910.2 166 SIAERERRTRISKRLRRLQDLVPNmD---K 192 689********************966...3 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MGGTRGGGGM GSGYAHSHSQ GGNADAMAAQ QRRLSSQWSF SRQQDMMPHI AEMGMAMPTP 60 MPPAADVGES IATGHGGGSS DLSRSFSMSS WDDTNSNIIF SAPGGGKKAK LMADGDDGMV 120 TSFSNIDSQF GSSMDMPGMD DYLQLQQDSV ACRVRAKRGC ATHPRSIAER ERRTRISKRL 180 RRLQDLVPNM DKQTNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-20	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG062910.2