PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG064320.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 201aa    MW: 21742.9 Da    PI: 11.0388
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG064320.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.32.7e-4339137199
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrrkC++dCv+apyfp ++p+kf  vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+v+vi+ lq++l+ql+++
  TRIDC3BG064320.4  39 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAVISILQRNLRQLQQD 131
                       7******************************************************************************************** PP

            DUF260  94 lallke 99 
                       la++k 
  TRIDC3BG064320.4 132 LARAKY 137
                       *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
RMASSSASSL PAPGGSVITL AVSSAGGNGA GGVCGTGSPC AACKFLRRKC QPDCVFAPYF  60
PPDNPQKFVH VHRVFGASNV TKLLNELHPY QREDAVNSLA YEADMRLRDP VYGCVAVISI  120
LQRNLRQLQQ DLARAKYELS KYQLTVILAS VGGGAERVAG DGGVHRQRGA ERRGELHQRR  180
ALRGARLRRR GHGLRARPSV R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.39e-57LBD family protein