PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG064950.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 224aa    MW: 24817 Da    PI: 9.0985
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG064950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF922.9e-2992142151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       krien+snrqvtfskR+ng+lKKA+E+SvLCdaev v++fss gkly+++s
  TRIDC3BG064950.1  92 KRIENQSNRQVTFSKRKNGVLKKAKEISVLCDAEVGVVVFSSAGKLYDFCS 142
                       79***********************************************96 PP
2K-box65.91.4e-22154222169
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 
                       yq++sgk l+++k++sl+ e++++kke++n+q e+Rhl+GedL+sL+ keL  +e++L+++l++  +k+
  TRIDC3BG064950.1 154 YQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGLTSLHEKQ 222
                       89999999********************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
PSQAKQTEPL PFPAPTPEPP RKPPHHHSSS SHGGLLYSSS SSFPTPTPTT TAIPQSHHAR  60
TGPQSARRNE PFLAPPEEEE GGGMGRGKIE IKRIENQSNR QVTFSKRKNG VLKKAKEISV  120
LCDAEVGVVV FSSAGKLYDF CSPKTSLSRI LEKYQTNSGK ILWDEKHKSL SAEIDRIKKE  180
NDNMQIELRH LKGEDLNSLQ PKELIMIEEA LDNGLTSLHE KQAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.18e-52MIKC_MADS family protein