PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG064950.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 292aa    MW: 32800 Da    PI: 7.5285
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG064950.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.44.6e-2992142151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       krien+snrqvtfskR+ng+lKKA+E+SvLCdaev v++fss gkly+++s
  TRIDC3BG064950.2  92 KRIENQSNRQVTFSKRKNGVLKKAKEISVLCDAEVGVVVFSSAGKLYDFCS 142
                       79***********************************************96 PP
2K-box72.51.2e-24154248195
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                       yq++sgk l+++k++sl+ e++++kke++n+q e+Rhl+GedL+sL+ keL  +e++L+++l++  +k++e++ + +++ ++ e+e++    +
  TRIDC3BG064950.2 154 YQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGLTSLHEKQMEHYDRLVKHGKMLEDENKLLAFK 246
                       79999999*************************************************************************999999877666 PP

             K-box  94 Lr 95 
                        +
  TRIDC3BG064950.2 247 VH 248
                       65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
PSQAKQTEPL PFPAPTPEPP RKPPHHHSSS SHGGLLYSSS SSFPTPTPTT TAIPQSHHAR  60
TGPQSARRNE PFLAPPEEEE GGGMGRGKIE IKRIENQSNR QVTFSKRKNG VLKKAKEISV  120
LCDAEVGVVV FSSAGKLYDF CSPKTSLSRI LEKYQTNSGK ILWDEKHKSL SAEIDRIKKE  180
NDNMQIELRH LKGEDLNSLQ PKELIMIEEA LDNGLTSLHE KQMEHYDRLV KHGKMLEDEN  240
KLLAFKVHQH DIALSGSMRD LELGYHPDRD FAAQMPITFR VQPSHPNLQE DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.17e-63MIKC_MADS family protein