PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG065610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 252aa    MW: 27305.1 Da    PI: 9.1935
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG065610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.67.7e-17112514128
               NAM  14 lvveyLkkkvegkk..leleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlsk 95 
                       lv++yL+++++g++  + +++ ++e+d+y ++P +L +       k+++e+k+wyfFs  + ++a+++rk r++   +g+Wk+    ++v  +
  TRIDC3BG065610.1   1 LVSFYLRPRISGQPlpNAAKHYFHEADVYATDPASLVAgrlpgpaKAQGESKNWYFFSLVKPRSAQDSRKCRIVGggKGTWKQERG-NDVAGA 92 
                       899***********64334445**************7456788878888899********************76656899**7755.677777 PP

               NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +g+++g  + +++    +++ +  +W+m e+++
  TRIDC3BG065610.1  93 EGRAIGRLERFTYTPSPKEDKKPPEWLMTEFSV 125
                       9*************8888888899*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
LVSFYLRPRI SGQPLPNAAK HYFHEADVYA TDPASLVAGR LPGPAKAQGE SKNWYFFSLV  60
KPRSAQDSRK CRIVGGGKGT WKQERGNDVA GAEGRAIGRL ERFTYTPSPK EDKKPPEWLM  120
TEFSVDQHGD GGQPTPVLCL CKIYQSPRFL KSASKNSASA RKRKSPADES SAVKRQLLFP  180
APPPPPIPLL PVLFPPPPPP APNLLAEDDV WAHIGADPEL NFSVEEFTAP WPCSMTAAAP  240
SLLGSGHGSQ CA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-08NAC family protein