PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG065650.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1108aa MW: 123105 Da PI: 8.6082

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG065650.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00041	1014	1037	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk F ++ +L +H ++H TRIDC3BG065650.3 1014 TCPvkGCGKKFFTHKYLLQHRKVH 1037 79999*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1108 aa Download sequence
QQPAHVGETA WNMRTAARNP GSLLRFMRDE VPGVTTPMLY VGMLFSWFAW HVEDHDLHSL 60 NYMHLGAAKT WYGVPRDAAL AFEDVVRVHG YAGEVNPLEA FATLGNKTTL LSPELLVGSG 120 VPCCRLVQNA GEFVVTFPGS YHCGFSHGFN CGEASNIATP EWLRVAKEAA VRRASINQPP 180 MLSHYQLLYE LALSMCIRDP SIGAMEPRSS RLKEKKKGEG GQLVKKLFVQ NAIQDNELLS 240 CLLNDGSSCI ILPINAHDGP VLSALRSRSQ LIPKSKLSDG LCSNGETLEA FARCTHNSHN 300 AEGDKADVIS ATGLLDQGLL SCVSCGILSF SCVAVIKPRE CASKYFMSYD YNSINDQLVD 360 SGGCHLANAA GSEGTNGGIL RPGFELHGTE ILPDAGPVTD SAPDLLASAY GNQPDTDEHN 420 RNKKIKVSHD SSELDGTKIP SSSIKCQQRP SSQSSQCIGG SSISNGPRGV RTRNKYQLKM 480 ALSQGFQLKN NYWTMEQKVQ PEPTRSKETV KEPLDASGAD NDARCSTAIS VGGPRISTTT 540 MDSLNKPIVK IDKDSARMHV FCLEHAVEVE KQLQAIGGAH VILLCRPEYL RIEAEARSLA 600 AELEVEHGWK DIHFREANME DRKMIEELQQ DEESIPTSSD WAVKLGTNLY YSANLAKSPL 660 HNKQIPYNRV IYRAFGRSSP DNSPVKLENC EGSRDTQKKI VLAGRWCGKA WMSNQVHPFL 720 AQRIESSELE ETDKSSGVEA SKRNSSTITD VPKSSSKKRE NMAVEVTTDT KRPRLAKGYS 780 SKALKGVAEV SHPSPTAVVP RVSSRIADRA NRLKSEMTEE PKATSHSRTR PPKKFEVEAK 840 KQMKMRKEDK MMAPTAPKDD EERPSATKGG PSVGPATKLE FSQRKRRTRT DTMKQLKKAT 900 GEERTPRDHP MHVEGYTCSI EGCSMSFDTR NKLSLHELDM CPVEGCGKKF FTHKFLLQHG 960 KIHIETTKQL KKATGEERAP RDHRMRVEGY TCTIEGCSMS FDTKKELSLH ERDTCPVKGC 1020 GKKFFTHKYL LQHRKVHTDD RPLKCPWEGC DVAFKWAWAR TEHLRVHTGD RPYVCREPGC 1080 AETFRFISDF SRHKRETGHS TKQTKTKT

Sequence ? help Back to Top

Protein Sequence Length: 1108 aa Download sequence

QQPAHVGETA WNMRTAARNP GSLLRFMRDE VPGVTTPMLY VGMLFSWFAW HVEDHDLHSL  60
NYMHLGAAKT WYGVPRDAAL AFEDVVRVHG YAGEVNPLEA FATLGNKTTL LSPELLVGSG  120
VPCCRLVQNA GEFVVTFPGS YHCGFSHGFN CGEASNIATP EWLRVAKEAA VRRASINQPP  180
MLSHYQLLYE LALSMCIRDP SIGAMEPRSS RLKEKKKGEG GQLVKKLFVQ NAIQDNELLS  240
CLLNDGSSCI ILPINAHDGP VLSALRSRSQ LIPKSKLSDG LCSNGETLEA FARCTHNSHN  300
AEGDKADVIS ATGLLDQGLL SCVSCGILSF SCVAVIKPRE CASKYFMSYD YNSINDQLVD  360
SGGCHLANAA GSEGTNGGIL RPGFELHGTE ILPDAGPVTD SAPDLLASAY GNQPDTDEHN  420
RNKKIKVSHD SSELDGTKIP SSSIKCQQRP SSQSSQCIGG SSISNGPRGV RTRNKYQLKM  480
ALSQGFQLKN NYWTMEQKVQ PEPTRSKETV KEPLDASGAD NDARCSTAIS VGGPRISTTT  540
MDSLNKPIVK IDKDSARMHV FCLEHAVEVE KQLQAIGGAH VILLCRPEYL RIEAEARSLA  600
AELEVEHGWK DIHFREANME DRKMIEELQQ DEESIPTSSD WAVKLGTNLY YSANLAKSPL  660
HNKQIPYNRV IYRAFGRSSP DNSPVKLENC EGSRDTQKKI VLAGRWCGKA WMSNQVHPFL  720
AQRIESSELE ETDKSSGVEA SKRNSSTITD VPKSSSKKRE NMAVEVTTDT KRPRLAKGYS  780
SKALKGVAEV SHPSPTAVVP RVSSRIADRA NRLKSEMTEE PKATSHSRTR PPKKFEVEAK  840
KQMKMRKEDK MMAPTAPKDD EERPSATKGG PSVGPATKLE FSQRKRRTRT DTMKQLKKAT  900
GEERTPRDHP MHVEGYTCSI EGCSMSFDTR NKLSLHELDM CPVEGCGKKF FTHKFLLQHG  960
KIHIETTKQL KKATGEERAP RDHRMRVEGY TCTIEGCSMS FDTKKELSLH ERDTCPVKGC  1020
GKKFFTHKYL LQHRKVHTDD RPLKCPWEGC DVAFKWAWAR TEHLRVHTGD RPYVCREPGC  1080
AETFRFISDF SRHKRETGHS TKQTKTKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	883	888	QRKRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-128	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG065650.3