PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG066290.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 297aa MW: 31731.2 Da PI: 9.3888

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG066290.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00091	270	293	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+++Fs+ L H r H TRIDC3BG066290.2 270 HVCNSCNRTFSSLKGLGDHSRAkH 293 79************9999988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MHLCSLTVFL SVVTSHSCTK QDAESDEEVP LAIPLDFNTD GYKDNEAAHG ANNLIAPRPA 60 DAPSSIPMAK VEGTNSPGKQ KGDDKDKTGM QNSSDGVDNE SSDQDVDYPR KRTKDDYNPM 120 ETPLNTPQGK RAKIATPTTG NKTGYVHVAT PHPAAKQARK SGDHVHVATP HPAIKQARKS 180 GDHVHVATPH PAAKQAHKSG EHVHVATPHP AAKQARKSVD RVHVATPHPA AKQACKSGDH 240 VHVVTPHPAA KHARKTLENN DDKSKQSAGH VCNSCNRTFS SLKGLGDHSR AKHGDAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03740.1	2e-06	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG066290.2