PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG066290.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 230aa MW: 24626.3 Da PI: 10.4198

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG066290.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00065	203	226	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+++Fs+ L H r H TRIDC3BG066290.6 203 HVCNSCNRTFSSLKGLGDHSRAkH 226 79************9999988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MAKVEGTNSP GKQKGDDKDK TGMQNSSDGV DNESSDQDVD YPRKRTKDDY NPMETPLNTP 60 QGKRAKIATP TTGNKTGYVH VATPHPAAKQ ARKSGDHVHV ATPHPAIKQA RKSGDHVHVA 120 TPHPAAKQAH KSGEHVHVAT PHPAAKQARK SVDRVHVATP HPAAKQACKS GDHVHVVTPH 180 PAAKHARKTL ENNDDKSKQS AGHVCNSCNR TFSSLKGLGD HSRAKHGDAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03740.1	2e-06	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG066290.6