PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG066660.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 286aa    MW: 31854.6 Da    PI: 6.4192
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG066660.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.86.1e-141966148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd ll+  ++ +G g+W+  a   g++Rt+k+c++rw++yl
  TRIDC3BG066660.1 19 RGPWTMEEDALLAGHIAAHGEGRWNELACAAGLRRTGKSCRLRWLNYL 66
                      89********************************************97 PP
2Myb_DNA-binding51.72.1e-1672115146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +T++E++l+++++ ++G++ W++Iar+m+ gRt++++k++w++
  TRIDC3BG066660.1  72 RGDFTPQEQLLILELHFRWGSR-WSRIAREMP-GRTDNEIKNYWRT 115
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
WPAAAATTGG EQEAVDLRRG PWTMEEDALL AGHIAAHGEG RWNELACAAG LRRTGKSCRL  60
RWLNYLRPDV RRGDFTPQEQ LLILELHFRW GSRWSRIARE MPGRTDNEIK NYWRTRVQKH  120
AKQLKCDVDS RQFRDVMRHL WMPRLVERIQ AATAMPAPSL EHAASPVYPL SVAPACRGGV  180
GMCHSPETST VTTSSTAGSS VSLEVHFPSN QLVLTAGSGT NWSGSGSEQC GSGSARSEDM  240
FDGSWSELLA RACDDGADSV VFPDFELGES RDDKWSLEDI WLQHQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.13e-76MYB family protein