PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG067620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 260aa    MW: 27455.2 Da    PI: 11.5098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG067620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.5e-10101148455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k + Ka +L + ++Y++sLq
  TRIDC3BG067620.1 101 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 148
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
GGSDGNARKR KAAGGSKGKG KDASMSTTSA KDLLAKEDSA SKRCKSTSME DAEENSGKGK  60
AAQSSSENGG KKQGKDGASK LPEPPKDFIH VRARRGEATD SHSLAERVRR EKISQRMKLL  120
QDLVPGCNKV VGKAVMLDEI INYVQSLQRQ VEVSVHEAGH GEPAAGLQQP AQPPRQRYAA  180
AVMWAAAAGL VAFPAGGVGR AAPLHGPGKR RPSRLRHVRR RHGRRSGRHA PAGPGLLPAH  240
GFLTAAAAAL PQRRRLSGMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48560.12e-45bHLH family protein