PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG067620.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 474aa MW: 49746.5 Da PI: 6.4483

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG067620.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.3	1.6e-09	276	323	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq TRIDC3BG067620.5 276 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 323 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MNCGPPDQLP PATAGFLNLN WDSSMDAGGH PSPASGSAAA TEGLALHGIS PRPQHYGAGT 60 PLGSPTKLNL SMMGQYRHHN HHYPPPQVGG AGLPTLENLM PMGSLDQFLA DPGFAERAAR 120 LSGFDARGGY GGGPAQFGLP DDGPVGALKE LELGSARDDS SVSDPASAGA GMALKGGSDG 180 NARKRKAAGG SKGKGKDASM STTSAKDLLA KEDSASKRCK STSMEDAEEN SGKGKAAQSS 240 SENGGKKQGK DGASKLPEPP KDFIHVRARR GEATDSHSLA ERVRREKISQ RMKLLQDLVP 300 GCNKVVGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPQL DFNNLPSLLA KDMQQQSCGQ 360 LQQGSSHFPL EASGAPLPYM GQGNGDPLGC GMSDGGMGDD QGAMHPLDQA FCRPMGSSQQ 420 QQQHFLSDAA SQVGAFWQDL QSVVQMDMGQ SQELATSSNS YDGSLQTVHM KMEL

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MNCGPPDQLP PATAGFLNLN WDSSMDAGGH PSPASGSAAA TEGLALHGIS PRPQHYGAGT  60
PLGSPTKLNL SMMGQYRHHN HHYPPPQVGG AGLPTLENLM PMGSLDQFLA DPGFAERAAR  120
LSGFDARGGY GGGPAQFGLP DDGPVGALKE LELGSARDDS SVSDPASAGA GMALKGGSDG  180
NARKRKAAGG SKGKGKDASM STTSAKDLLA KEDSASKRCK STSMEDAEEN SGKGKAAQSS  240
SENGGKKQGK DGASKLPEPP KDFIHVRARR GEATDSHSLA ERVRREKISQ RMKLLQDLVP  300
GCNKVVGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPQL DFNNLPSLLA KDMQQQSCGQ  360
LQQGSSHFPL EASGAPLPYM GQGNGDPLGC GMSDGGMGDD QGAMHPLDQA FCRPMGSSQQ  420
QQQHFLSDAA SQVGAFWQDL QSVVQMDMGQ SQELATSSNS YDGSLQTVHM KMEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	7e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG067620.5