PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG067780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 213aa    MW: 23550.7 Da    PI: 8.9623
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG067780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.91.3e-11106131227
                       -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                       ++++C ++ +tG Ck+G+ CkF+H++
  TRIDC3BG067780.1 106 DQPECIYYIKTGDCKFGAVCKFHHPR 131
                       689*********************96 PP
2zf-CCCH42.97.8e-14151177127
                       --S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                       +++elC+f++r+G+Ck+G +CkF H++
  TRIDC3BG067780.1 151 PGEELCKFYSRYGICKFGVNCKFDHPM 177
                       689**********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MASWTYPRGS FIPSPRWQSP SNYTPMIVPQ GLVQVPNWNS YPGQMVPVSS PESRLQSPGA  60
QQYYGTSRQG EASAGNQGMQ SPYRSSSFPA PQYALQRENV FPERPDQPEC IYYIKTGDCK  120
FGAVCKFHHP RVRSQPPPDC ILSPMGLPLR PGEELCKFYS RYGICKFGVN CKFDHPMAAP  180
MGVYAYGYSA SASPNAPMAR RLLESPSGSA YAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.12e-62C3H family protein