PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG068940.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 117aa    MW: 12061.6 Da    PI: 10.2567
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG068940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP76.64.1e-2468115249
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 
                       C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsr+
  TRIDC3BG068940.2  68 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRY 115
                       ***********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
LGTVVAPSSG GGGGGGALDL KLGAPTSWRP VPAGAAAAVV SVQQQQPPSA APAKRARAGQ  60
GQQTVPPCSV EGCTADLSRC REYHRRHKVC EAHSKTPVVA VAGQQQRFCQ QCSRYTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-22SBP family protein