PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG068940.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 170aa    MW: 18790.9 Da    PI: 8.8832
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG068940.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP44.63.7e-143324978
                      EEETTT--SS--S-STTTT-------S--- CS
               SBP 49 fhelsefDeekrsCrrrLakhnerrrkkqa 78
                      fh l efDe krsCr+rL++hn+rrrk+q 
  TRIDC3BG068940.4  3 FHLLGEFDEVKRSCRKRLDGHNRRRRKPQR 32
                      9**************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MWFHLLGEFD EVKRSCRKRL DGHNRRRRKP QRDPLNPAGL FANHHGVTRF ASYPQIFSPT  60
SMAEPKWPGG IAVKTEADAF HEQYYSFSGA ASLFHHGKPE RKHFPFLTDG GGEATFGCQP  120
PAFTITPSSE SSSNSSRHSN GKTTMFAHDG GPDHNCALSL LSDNPASAHI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11330KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-15SBP family protein