PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG069180.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 64aa    MW: 7406.67 Da    PI: 11.1309
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG069180.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.19.5e-281160251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqv fskRr+g++KKA+EL vLCdaeva+++fs+ gklyeys+
  TRIDC3BG069180.3 11 RIEDRTSRQVRFSKRRAGLFKKAFELAVLCDAEVALLVFSPAGKLYEYST 60
                      8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    
MARRGRVELR RIEDRTSRQV RFSKRRAGLF KKAFELAVLC DAEVALLVFS PAGKLYEYST  60
SRPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51870.28e-26MIKC_MADS family protein