PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG069250.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 98aa    MW: 11088 Da    PI: 11.5922
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG069250.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.52.8e-261463251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqv fskRr g++KKA+EL vLCdaev++++fs+ g+lyey+s
  TRIDC3BG069250.5 14 RIEDRTSRQVRFSKRRSGLFKKAFELAVLCDAEVSLLVFSPAGRLYEYAS 63
                      8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
VVGMARRGRV ELRRIEDRTS RQVRFSKRRS GLFKKAFELA VLCDAEVSLL VFSPAGRLYE  60
YASSRCMPLA DPRTLFCLPA RSSAISPTGR KPISKENR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.13e-29MIKC_MADS family protein