PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG070190.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 170aa    MW: 18851.9 Da    PI: 9.7523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG070190.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.12.7e-12648754
                      HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  TRIDC3BG070190.2  6 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 48
                      89*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIDYLKELLQ RISDLHSELE  60
SAPSSAALGG PSTANSFLPS TPTLQPFPGR IKEERCPPAP FPSPSGQQAT VEVRMREGQA  120
VNIHMFCARR PGILLSTMRA LDSLGLDIEQ AVISCFDGFA MDVFRAEVRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.11e-80bHLH family protein