PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG070190.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 297aa    MW: 31021.1 Da    PI: 5.4036
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG070190.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.8e-12122164754
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  TRIDC3BG070190.6 122 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 164
                       79*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
DYNAAFPSSS SSAAAAPPAY HDFGSGGNPF SVDAPPFLLE APPPLTVAPG GQKGGFLAPP  60
LSAFGDGMGW DDEDELDQQS VDASSLGVSA SLENAVVGAP GGGGGGGNGK GKKKGMPAKN  120
LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIDY LKELLQRISD LHSELESAPS  180
SAALGGPSTA NSFLPSTPTL QPFPGRIKEE RCPPAPFPSP SGQQATVEVR MREGQAVNIH  240
MFCARRPGIL LSTMRALDSL GLDIEQAVIS CFDGFAMDVF RAEVPMQGGP WAPAGGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112130KKKGMPAKNLMAERRRRKK
2124131ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.19e-81bHLH family protein