PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG071360.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 793aa    MW: 88818.5 Da    PI: 6.4423
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG071360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.5e-23101202199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG071360.1 101 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 189
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG071360.1 190 GESGELRVGVRRA 202
                       49999*****996 PP
2Auxin_resp106.43.3e-35227308183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3BG071360.1 227 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 308
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 793 aa     Download sequence    
GPLVTVPRVG DMVYYFPQGH IEQVEASMNQ VAANQMRLYD LPSKLLCRVL NVELKAEADT  60
DEVYAQVMLM PEPEQSDATT TEKSSPATGG TTPARLAVRS FCKTLTASDT STHGGFSVLR  120
RHADECLPPL DMTQSPPTQE LVAKDLHGME WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV  180
AGDAFIFLRG ESGELRVGVR RAMRQLSNIA SSVISSHSMH LGVLATAWHA INTKTMFTVY  240
YKPRTSRSEF IIPYDKYMDS VKNIYSIGTR FKMRFEGEEA PEQRFTGTIV GSDNLDQLWP  300
ESSWRSLKVR WDESSTIPRP DRVSPWEIEP ASSPPVNPLP LSRAKRSRPN VPPASPESSL  360
RTKEGATKAD MDCAQAQRNQ NNTVLPGQEQ RSNKLTDIND FDATVQKPMM WSPPPPNIGK  420
TNPLTFQQRP SVHNSIQLGR RETDFKDASS GAQPFGDSLG FFMQTTFDEA PNRLGSFKNQ  480
FQDHSYARQF ADPYLFMHQQ PSLTVESSRK MHTENNDLHF WNGPSTVYGN SIDQAQDFRF  540
KEHPSNWLSP QFSRAEQPRV IRPHASIAPI ELEKTTEGSD FKIFGFKVDT ASAGFNHLNS  600
PMAGTHEPVL QTQPSVSLDH LQTDCSPEVS LSIAGTTENE KNMQQCPQSS KDVQSKSHGA  660
STRSCTKVHK QGVALGRSVD LSKFVDYDEL TAELDKMFEF DGELMSSNKN WQIVYTDNEG  720
DMMLVGDDPW EEFCSIVRKI CIYTKEEVQK MNSKPSGPRK EEGSVDGDGA TEKAHLPESS  780
DLNSSQLGCV KAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein